Epigenetic control of gene expression

Epigenetics

Epigenetics encompasses a variety of highly conserved molecular mechanisms that provide an additional layer of information superimposed on the genetic code. Epigenetic repression of transcription also plays an essential role in suppressing the activity of transposable elements, which could have deleterious effects on the host organism. This transcriptional repression can bring endogenous genes under epigenetic control when transposons integrate in their vicinity. This type of regulation of gene expression is very general and has been observed in prokaryotes and eukaryotes

While there are some reports proposing a tissue specific epigenetic code in plants this has so far not been investigated systematically. This research project will give fundamental insights into the mechanisms of epigenetic coordination of development and the role of transposons in this process.

Research topics

  • Epigenetics
  • Transposons
  • Regulation of tissue specific gene expression

Interdisciplinary

  • Genomics
  • Bioinformatics

Contact Person

Dr. Etienne Bucher

University of Basel
Institute of Botany
Website
e.bucher-at-unibas.ch
+41 (0)61 267 23 17

eligible for PLANT FELLOWS

Recent publications

  • Title: Loss of DNA methylation affects the recombination landscape in Arabidopsis
    Author(s): Mirouze, Marie; Lieberman-Lazarovich, Michal; Aversano, Riccardo; et al.
    Source: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109 (15): 5880-5885 APR 10 2012
    Document type: Article (Details)
  • An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress
    Ito, H; Gaubert, H; Bucher, E; et al.
    NATURE 472 (7341): 115-U151 APR 7 2011 (Details)
  • siRNA pathway control transgenerational transposition of heat-activated retrotransposon in Arabidopsis
    Ito, H; Bucher, E; Herve, G; et al.
    GENES & GENETIC SYSTEMS 85 (6): 435-435 DEC 2010 (Details)
  • Stress-Induced Activation of Heterochromatic Transcription
    Tittel-Elmer, M; Bucher, E; Broger, L; et al.
    PLOS GENETICS 6 (10): Art. No. e1001175 OCT 2010 (Details)